- #INSTALL SAMTOOLS ON MAC HOW TO#
- #INSTALL SAMTOOLS ON MAC INSTALL#
- #INSTALL SAMTOOLS ON MAC UPGRADE#
However, some software will be installed through other commands and tools.įor example, Ruby gems are installed with the “gem install” command once you’ve installed Ruby via apt-get.
#INSTALL SAMTOOLS ON MAC INSTALL#
The above commands will help you install and update most common software you’ll require. To remove any packages that were installed as dependencies and are no longer required, run the following command: sudo apt-get autoremove If you uninstall a package and then remove it later, your system may still have a number of additional dependencies that are no longer necessary. Neither of the above commands will remove any “dependencies,” which are packages that were installed because they were required for a package. If you’d like to remove everything associated with the software package, run the following command instead: sudo apt-get purge packagename The above command just removes the package’s binary files, but not any associated configuration files. To uninstall a package when you’re done with it, run the following command: sudo apt-get remove packagename Remember to run the “sudo apt-get update” command before you run this command, as you need to update your package lists before apt-get will see the latest available versions.
#INSTALL SAMTOOLS ON MAC UPGRADE#
To update your installed software packages to the latest available versions in the repository–which gives you any security updates available for your current packages–run the following command: sudo apt-get upgrade
#INSTALL SAMTOOLS ON MAC HOW TO#
How to Update All Your Installed Packages apt-cache search sometextįor example, if you wanted to search for packages related to w3m, a text-based web browser for the terminal, you’d run: apt-cache search w3m However, you can run it with sudo if you like, and it will still work. This command doesn’t require sudo, as it’s just a simple search. This command searches package names and descriptions for the text you specify. In this case, you can use the apt-cache command to search your downloaded package cache (the lists that were download with apt-get update) for a program. You may not always know the name of the package you want to install. After running this and other apt-get commands, you’ll be presented with the changes that will be made and you’ll have to type “y” and press Enter to continue.
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